STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATCGlutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family. (194 aa)    
Predicted Functional Partners:
A0A060XMU6
GatB_N domain-containing protein.
    
 0.971
A0A060YRP4
GatB_Yqey domain-containing protein.
    
 0.971
A0A060XK75
GatB_N domain-containing protein.
    
 0.946
A0A060WUE5
Amidase domain-containing protein.
    
 0.940
A0A060WWC1
Amidase domain-containing protein.
    
 0.940
A0A060YSN6
Amidase domain-containing protein.
    
 0.940
A0A060X623
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.937
A0A060WL80
Amidase domain-containing protein.
    
 0.908
A0A060WRP3
Uncharacterized protein.
    
 0.908
A0A060WZ08
Amidase domain-containing protein.
    
 0.908
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.