STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060W7R0Macro domain-containing protein. (493 aa)    
Predicted Functional Partners:
A0A060WTR3
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
  
 
 
 0.673
A0A060W7A5
Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes.
  
 
 
 0.672
A0A060WQQ5
Uncharacterized protein.
  
 0.667
A0A060XYF9
Uncharacterized protein.
  
    0.630
A0A060YC28
Uncharacterized protein.
  
    0.630
A0A060XPU5
Uncharacterized protein.
  
 0.587
A0A060YJV1
Hist_deacetyl domain-containing protein.
  
  0.576
A0A060YVU5
Hist_deacetyl domain-containing protein.
  
  0.576
A0A061A5A4
Uncharacterized protein.
  
  0.576
A0A060W390
Rieske domain-containing protein.
  
 0.549
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.