STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WBG5Ras-associating domain-containing protein. (414 aa)    
Predicted Functional Partners:
A0A060VXS5
Interfer-bind domain-containing protein.
    
 
 0.624
A0A060VXY9
Fibronectin type-III domain-containing protein.
    
 
 0.624
A0A060W122
Uncharacterized protein.
    
 
 0.624
A0A060W7Q8
Uncharacterized protein.
    
 
 0.624
A0A060WNZ8
Uncharacterized protein.
    
 
 0.624
A0A060WPS8
Uncharacterized protein.
    
 
 0.624
A0A060WQ17
Uncharacterized protein.
    
 
 0.624
A0A060X3I2
Uncharacterized protein.
    
 
 0.624
A0A060X410
Uncharacterized protein.
    
 
 0.624
A0A060XYX9
Fibronectin type-III domain-containing protein.
    
 
 0.624
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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