STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WEL7Uncharacterized protein. (802 aa)    
Predicted Functional Partners:
A0A060YA01
Prp31_C domain-containing protein.
   
 0.992
A0A060W334
MFAP1 domain-containing protein.
   
 0.989
A0A060Y8T8
Uncharacterized protein.
   
 0.988
A0A060XMR2
Uncharacterized protein.
   
 0.987
A0A060X6R4
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
    
 0.986
A0A060Y410
Uncharacterized protein.
   
 0.986
A0A060Z4V8
Uncharacterized protein.
   
 0.986
A0A060ZBC5
PRP1_N domain-containing protein.
   
 0.986
A0A060XDA8
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
    
 0.985
A0A060XIJ6
U1-type domain-containing protein.
    
 0.985
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (22%) [HD]