STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WEU0CAP-Gly domain-containing protein. (2965 aa)    
Predicted Functional Partners:
A0A060X4J5
Uncharacterized protein.
    
 
 0.947
A0A060YCU0
Uncharacterized protein.
    
 
 0.947
A0A060XN96
Uncharacterized protein.
   
    0.813
A0A060WWL9
Uncharacterized protein.
    
 
 0.795
A0A060XHD4
Uncharacterized protein.
   
    0.766
A0A060XI19
Uncharacterized protein.
   
    0.766
A0A060XVW7
Uncharacterized protein.
    
 0.713
A0A060YBX9
Uncharacterized protein.
    
 0.713
A0A060WBF1
Uncharacterized protein.
    
   0.700
A0A060WZZ9
EF-hand_13 domain-containing protein.
    
   0.700
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.