STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WFR6Uncharacterized protein. (229 aa)    
Predicted Functional Partners:
A0A060W252
WD_REPEATS_REGION domain-containing protein.
   
 
 0.852
A0A060YJC9
WD_REPEATS_REGION domain-containing protein.
   
 
 0.852
A0A060ZBN4
Uncharacterized protein.
   
 
 0.852
A0A060XYA1
Uncharacterized protein.
    
 0.767
RTP12
12.5 kDa retinal tissue protein.
    
 0.767
A0A060WI42
Uncharacterized protein.
    
 
 0.747
A0A060Y9S8
Peptidyl-prolyl cis-trans isomerase.
    
 0.687
A0A060WSN8
RING-type domain-containing protein.
    
 
 0.685
A0A060X9L6
RING-type domain-containing protein.
    
 
 0.685
A0A060XG31
P53 domain-containing protein.
    
 0.685
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.