STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WIJ8Transcription factor SOX. (372 aa)    
Predicted Functional Partners:
A0A060XXJ7
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
    
 
 0.743
A0A060X3P9
POU domain protein.
    
 0.718
A0A060XM27
POU domain protein.
    
 0.718
A0A060Y1M5
Uncharacterized protein.
    
 0.711
A0A060YC30
CTNNB1_binding domain-containing protein.
    
 0.702
A0A060Y0P6
Homeobox domain-containing protein.
    
 0.663
A0A060W3U6
Uncharacterized protein.
     
0.601
A0A060WHH8
Uncharacterized protein.
    
 0.585
A0A060WU50
Uncharacterized protein.
    
 0.585
A0A060X9M2
Uncharacterized protein.
    
 0.585
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.