STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WJE1Uncharacterized protein. (311 aa)    
Predicted Functional Partners:
A0A060X1J9
Uncharacterized protein.
    
 0.791
A0A060WY75
Fam20C domain-containing protein.
    
  0.724
A0A060X811
Fam20C domain-containing protein.
    
  0.696
A0A060XAZ3
Fam20C domain-containing protein.
     
 0.569
A0A060XLT8
Fam20C domain-containing protein.
     
 0.569
A0A060VPK1
Calreticulin.
   
 
 0.564
A0A060VSV9
Calreticulin.
   
 
 0.564
A0A060WET1
Calreticulin.
   
 
 0.564
A0A060WU94
Calreticulin.
   
 
 0.564
A0A060Y0I2
Calreticulin.
   
 
 0.564
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.