STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WNZ1Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
A0A060WI25
Uncharacterized protein.
    
   0.765
A0A060WXT4
Uncharacterized protein.
    
   0.765
A0A060XAU8
Uncharacterized protein.
    
   0.631
A0A060XVY0
Uncharacterized protein.
    
   0.631
A0A060Y182
Uncharacterized protein.
    
   0.631
A0A060YG05
Uncharacterized protein.
    
   0.631
A0A060YG13
Uncharacterized protein.
    
   0.631
A0A060ZBY4
Uncharacterized protein.
    
   0.631
A0A060W901
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.505
A0A060XF18
Ricin B-type lectin domain-containing protein.
      
 0.505
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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