STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WQH3Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (66 aa)    
Predicted Functional Partners:
A0A060W0Z6
TPR_REGION domain-containing protein.
    
 0.671
A0A060W7A6
TPR_REGION domain-containing protein.
    
 0.671
A0A060WCV3
TPR_REGION domain-containing protein.
    
 0.671
A0A060WX48
TPR_REGION domain-containing protein.
    
 0.671
A0A060VYX8
TPR_REGION domain-containing protein.
    
  0.654
A0A060Y9R6
TPR_REGION domain-containing protein.
    
  0.654
A0A060YNV9
Uncharacterized protein.
   
 
 0.638
SC61G
Transport protein SEC61 subunit gamma.
   
 
 0.638
A0A060YEI6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.625
A0A060XCE1
C1q domain-containing protein.
     
 0.600
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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