STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WVR3Uncharacterized protein. (618 aa)    
Predicted Functional Partners:
A0A060XH91
EAF domain-containing protein.
    
 0.969
A0A060XYK9
EAF domain-containing protein.
    
 0.969
A0A060W1D8
Uncharacterized protein.
   
 0.959
A0A060XQV8
Uncharacterized protein.
   
 0.959
A0A060XY33
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.948
A0A060WNU3
EAF domain-containing protein.
    
 0.940
A0A060X1B6
EAF domain-containing protein.
    
 0.940
RPB9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.897
A0A060XRQ2
Uncharacterized protein.
   
 0.896
A0A060XSA8
Uncharacterized protein.
   
 0.896
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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