STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WX27Neurogenic differentiation factor. (356 aa)    
Predicted Functional Partners:
A0A060WTG5
BHLH domain-containing protein.
   
 0.737
A0A060XDS1
Uncharacterized protein.
   
 0.737
A0A060VWL4
Homeobox domain-containing protein.
   
 0.665
A0A060XGH5
Homeobox domain-containing protein.
   
 0.665
A0A060Y5Y7
Homeobox domain-containing protein.
   
 0.665
A0A060XPI0
BHLH domain-containing protein.
   
 0.595
A0A060XWS1
BHLH domain-containing protein.
   
 0.595
A0A060Y593
Uncharacterized protein.
   
 0.595
A0A060X1P9
Uncharacterized protein.
   
 0.583
A0A060XJU7
Uncharacterized protein.
   
 0.583
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.