STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF6-2Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)    
Predicted Functional Partners:
A0A060XGD5
Uncharacterized protein.
  
 
 0.998
A0A060YLW6
Ribosomal_L18A domain-containing protein.
  
 
 0.997
A0A060XJT0
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.991
A0A060YCF4
Ribosomal_L7Ae domain-containing protein.
   
 
 0.991
A0A060YU78
Ribosomal_L7Ae domain-containing protein.
   
 
 0.991
A0A060YUT9
Ribosomal_L7Ae domain-containing protein.
   
 
 0.991
A0A060VZ36
Uncharacterized protein.
  
 
 0.990
A0A060VZV6
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 
 0.984
A0A060WX75
Uncharacterized protein.
  
 
 0.984
A0A060X685
Ribosomal_L11_N domain-containing protein.
  
 
 0.984
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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