STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060WY28FERM domain-containing protein. (572 aa)    
Predicted Functional Partners:
A0A060XI08
Uncharacterized protein.
    
 0.932
A0A060Y139
Uncharacterized protein.
    
 0.932
A0A060W9H2
PDZ domain-containing protein.
    
 0.907
A0A060WFD7
EBP50_C domain-containing protein.
    
 0.907
A0A060XG65
Na(+)/H(+) exchange regulatory cofactor NHE-RF; Scaffold protein that connects plasma membrane proteins with members of the ezrin/moesin/radixin family and thereby helps to link them to the actin cytoskeleton and to regulate their surface expression.
    
 0.907
A0A060YRA2
EBP50_C domain-containing protein.
    
 0.907
A0A060YIE7
WW domain-containing protein.
    
 0.889
A0A060W2A0
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
    
 0.862
A0A060YV63
Uncharacterized protein.
    
 0.829
A0A060YY55
Uncharacterized protein.
    
 0.829
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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