A0A060WZ10 protein (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A060WZ10

Metallophos domain-containing protein; Belongs to the 5'-nucleotidase family. (323 aa)

Predicted Functional Partners:

A0A060YM41

0.929

A0A060Z8B0

0.929

A0A060VUH5

0.924

A0A060YK16

0.913

A0A060ZF19

0.913

A0A060XL37

0.910

A0A060VVV3

0.903

A0A060VPR7

0.901

A0A060WTE4

0.901

A0A060XU67

0.899

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060VPR7	A0A060VVV3	PfkB domain-containing protein.	Pribosyltran domain-containing protein.	0.981
A0A060VPR7	A0A060WZ10	PfkB domain-containing protein.	Metallophos domain-containing protein; Belongs to the 5'-nucleotidase family.	0.901
A0A060VPR7	A0A060XL37	PfkB domain-containing protein.	Pribosyltran domain-containing protein.	0.983
A0A060VPR7	A0A060XU67	PfkB domain-containing protein.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.794
A0A060VPR7	A0A060YK16	PfkB domain-containing protein.	Uncharacterized protein.	0.813
A0A060VPR7	A0A060YM41	PfkB domain-containing protein.	AAA domain-containing protein.	0.972
A0A060VPR7	A0A060Z8B0	PfkB domain-containing protein.	Uncharacterized protein.	0.972
A0A060VPR7	A0A060ZF19	PfkB domain-containing protein.	Uncharacterized protein.	0.813
A0A060VUH5	A0A060WZ10	Cytochrome b5 heme-binding domain-containing protein.	Metallophos domain-containing protein; Belongs to the 5'-nucleotidase family.	0.924
A0A060VUH5	A0A060XU67	Cytochrome b5 heme-binding domain-containing protein.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.994
A0A060VVV3	A0A060VPR7	Pribosyltran domain-containing protein.	PfkB domain-containing protein.	0.981
A0A060VVV3	A0A060WTE4	Pribosyltran domain-containing protein.	PfkB domain-containing protein.	0.981
A0A060VVV3	A0A060WZ10	Pribosyltran domain-containing protein.	Metallophos domain-containing protein; Belongs to the 5'-nucleotidase family.	0.903
A0A060VVV3	A0A060XU67	Pribosyltran domain-containing protein.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.816
A0A060VVV3	A0A060YK16	Pribosyltran domain-containing protein.	Uncharacterized protein.	0.890
A0A060VVV3	A0A060YM41	Pribosyltran domain-containing protein.	AAA domain-containing protein.	0.971
A0A060VVV3	A0A060Z8B0	Pribosyltran domain-containing protein.	Uncharacterized protein.	0.971
A0A060VVV3	A0A060ZF19	Pribosyltran domain-containing protein.	Uncharacterized protein.	0.890
A0A060WTE4	A0A060VVV3	PfkB domain-containing protein.	Pribosyltran domain-containing protein.	0.981
A0A060WTE4	A0A060WZ10	PfkB domain-containing protein.	Metallophos domain-containing protein; Belongs to the 5'-nucleotidase family.	0.901