STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X0X5Uncharacterized protein. (290 aa)    
Predicted Functional Partners:
A0A060YMK2
Nudix hydrolase domain-containing protein.
   
 0.708
A0A060Y0Z1
Uncharacterized protein.
    
 
 0.675
A0A060VW88
Uncharacterized protein.
    
  0.660
A0A060XCD7
Uncharacterized protein.
    
  0.660
A0A060YI91
Uncharacterized protein.
    
  0.660
A0A060ZB05
Uncharacterized protein.
    
  0.660
A0A060VVI0
AA_permease_C domain-containing protein.
  
 
 0.523
A0A060WF39
AA_permease_C domain-containing protein.
  
 
 0.523
A0A060VWX8
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
     
 0.509
A0A060WUU3
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
   
 
 0.505
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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