STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X150Uncharacterized protein. (955 aa)    
Predicted Functional Partners:
A0A060YRD6
Uncharacterized protein.
    
 0.924
UBIM
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.916
UBIM-2
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.916
A0A060XDT2
Uncharacterized protein.
   
 0.840
A0A060X6J7
Uncharacterized protein.
    
 0.830
A0A060WKF8
Uncharacterized protein.
    
 0.825
A0A060YR87
Integrin beta.
    
 0.772
A0A060WTV0
Uncharacterized protein.
   
   0.702
A0A060WRK9
WD_REPEATS_REGION domain-containing protein.
    
 0.696
A0A060XPX1
WD_REPEATS_REGION domain-containing protein.
    
 0.696
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.