STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X2L0TLC domain-containing protein. (256 aa)    
Predicted Functional Partners:
A0A060YRH1
Guanylate kinase-like domain-containing protein.
    
 
 0.752
A0A060YSE6
Uncharacterized protein.
    
 
 0.752
A0A060XZY2
Uncharacterized protein.
    
 
 0.698
A0A060W2B5
Uncharacterized protein.
    
 
 0.678
A0A060VWJ6
Uncharacterized protein.
    
   0.551
A0A060XCG1
Uncharacterized protein.
    
 
 0.551
A0A060XHT9
Uncharacterized protein.
    
 
 0.551
A0A060YW80
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.551
A0A060YZ53
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.551
A0A060Z0Z6
Uncharacterized protein.
    
   0.551
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (20%) [HD]