STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X2W3AA_TRNA_LIGASE_II domain-containing protein. (596 aa)    
Predicted Functional Partners:
A0A060WQB7
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
     
 0.898
A0A060ZGS2
Uncharacterized protein.
  
 
 0.894
A0A060YF24
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
    
 0.890
A0A060WZ84
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.879
A0A060XA28
Uncharacterized protein.
  
 
 0.876
RM21
39S ribosomal protein L21, mitochondrial.
  
 
 0.876
A0A060YVJ6
RF_PROK_I domain-containing protein.
  
 
 0.874
A0A060W3P5
Mannosyltransferase.
     
 0.871
A0A060W6T9
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.871
A0A060WHR3
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.871
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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