STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X5N9Uncharacterized protein. (210 aa)    
Predicted Functional Partners:
A0A060VTH5
F-box domain-containing protein.
      
 0.512
A0A060XGR6
F-box domain-containing protein.
      
 0.506
A0A060XDY0
Uncharacterized protein.
      
 0.505
A0A060XV04
Uncharacterized protein.
      
 0.505
A0A060XVH2
Uncharacterized protein.
      
 0.505
A0A060W5Y9
Uncharacterized protein.
      
 0.504
A0A060XTL5
Uncharacterized protein.
      
 0.487
A0A060WXU6
Uncharacterized protein.
      
 0.478
A0A060WIH9
Uncharacterized protein.
      
 0.453
A0A060WJ01
SPARC_Ca_bdg domain-containing protein.
      
 0.453
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.