STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X654Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (793 aa)    
Predicted Functional Partners:
A0A060VYW9
Citrate synthase; Belongs to the citrate synthase family.
  
 0.990
A0A060WKC7
Citrate synthase; Belongs to the citrate synthase family.
  
 0.990
A0A060WFK8
Citrate synthase; Belongs to the citrate synthase family.
  
 0.989
A0A060XAB1
Citrate synthase; Belongs to the citrate synthase family.
  
 0.989
A0A060XIH6
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.986
A0A060Z0P2
Iso_dh domain-containing protein.
  
 0.986
A0A060XNA5
Uncharacterized protein.
  
 0.983
A0A060XTC5
ULP_PROTEASE domain-containing protein.
  
 
 0.983
A0A060WKD7
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.979
A0A060WZC3
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
 0.979
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.