STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X6B7Tnp_zf-ribbon_2 domain-containing protein. (93 aa)    
Predicted Functional Partners:
A0A060X0W8
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
    
 0.767
A0A060W4S7
Endo/exonuclease/phosphatase domain-containing protein.
     
 0.754
A0A060W4B3
Glyco_hydro_59M domain-containing protein.
     
 0.753
A0A060Y867
Uncharacterized protein.
    
 
 0.712
A0A060YTR5
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
 
 0.711
A0A060X522
Ribosomal_S10 domain-containing protein.
    
 
 0.704
A0A060X6J3
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
 
 0.702
A0A060WEK0
Uncharacterized protein.
    
 
 0.697
RM43
39S ribosomal protein L43, mitochondrial.
    
 
 0.697
A0A060YV07
Uncharacterized protein.
    
 
 0.694
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.