STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X6C4Poly [ADP-ribose] polymerase. (391 aa)    
Predicted Functional Partners:
A0A060VZM9
Uncharacterized protein.
   
 
 0.834
A0A060XU58
CUE domain-containing protein.
   
  
 0.816
A0A060X4G8
RING-type domain-containing protein.
   
 
 0.723
A0A060XJT9
RING-type domain-containing protein.
   
 
 0.723
A0A060YJ69
RING-type domain-containing protein.
   
 
 0.723
A0A060Z041
DTC domain-containing protein.
   
 
 0.723
A0A060WLS6
RING-type domain-containing protein.
   
 
 0.669
A0A060Z652
DTC domain-containing protein.
   
 
 0.669
A0A060ZGC5
RING-type domain-containing protein.
   
 
 0.669
A0A060WQQ5
Uncharacterized protein.
  
 0.655
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.