STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060X9X5Uncharacterized protein; Belongs to the SKP1 family. (195 aa)    
Predicted Functional Partners:
A0A060X8C1
F-box domain-containing protein.
    
 0.996
A0A060X6K3
RING-type domain-containing protein.
   
 0.995
A0A060YDZ7
FIST_C domain-containing protein.
    
 0.995
RBX1
RING-box protein 1.
   
 0.995
A0A060WEK9
PHD-type domain-containing protein.
   
 0.994
A0A060XFP0
Uncharacterized protein.
   
 0.994
A0A060VNC0
Uncharacterized protein.
   
 0.993
A0A060VNQ3
Uncharacterized protein.
   
 0.993
A0A060VQ57
Uncharacterized protein.
   
 0.993
A0A060VVK9
Uncharacterized protein.
   
 0.993
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.