STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XB48PH domain-containing protein. (479 aa)    
Predicted Functional Partners:
A0A060Y9C2
Uncharacterized protein.
   
 
  0.826
A0A060Y9J8
Uncharacterized protein.
   
 
  0.826
A0A060YSB3
Uncharacterized protein.
   
 
  0.826
A0A060Z2D1
Uncharacterized protein.
   
 
  0.826
A0A060Z400
Uncharacterized protein.
   
 
  0.826
A0A060WGJ0
Uncharacterized protein.
    
 0.755
A0A060WLB2
Uncharacterized protein.
    
 0.755
A0A060WLB6
Uncharacterized protein.
    
 0.755
A0A060WMW1
Uncharacterized protein.
    
 0.755
A0A060WFJ8
Uncharacterized protein.
    
 
 0.588
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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