STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XBU2GB1/RHD3-type G domain-containing protein. (516 aa)    
Predicted Functional Partners:
A0A060VWX4
UEV domain-containing protein.
   
 
 0.689
A0A060W411
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
   
 
 0.689
A0A060XMC4
Reticulon.
    
 
 0.571
A0A060XPM3
Reticulon.
    
 
 0.571
RTN11
Reticulon.
    
 
 0.571
RTN9
Reticulon.
    
 
 0.571
A0A060VV03
Receptor expression-enhancing protein.
    
 
 0.570
A0A060WPW3
Receptor expression-enhancing protein.
    
 
 0.570
A0A060WTL3
Reticulon.
    
 
 0.568
A0A060XT27
Reticulon.
    
 
 0.568
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (30%) [HD]