STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XE58Uncharacterized protein. (245 aa)    
Predicted Functional Partners:
A0A060WKV4
RIBOSOMAL_L9 domain-containing protein.
  
 
 0.987
A0A060XA28
Uncharacterized protein.
  
 
 0.987
A0A060Y8S0
Uncharacterized protein.
  
 
 0.987
A0A060WTV0
Uncharacterized protein.
  
 0.986
A0A060YCL2
Uncharacterized protein.
   
 0.986
RM21
39S ribosomal protein L21, mitochondrial.
  
 
 0.986
A0A060XL56
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.985
A0A060Y5M2
Ribosomal_S7 domain-containing protein.
 
 0.984
A0A060WHR3
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.982
A0A060Y867
Uncharacterized protein.
  
 
 0.982
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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