STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XE99Uncharacterized protein. (563 aa)    
Predicted Functional Partners:
A0A060YRE8
Uncharacterized protein.
  
 0.906
A0A060XVD9
Uncharacterized protein.
    
  0.874
A0A060YQL7
Uncharacterized protein.
   
 0.867
A0A060XZ87
Uncharacterized protein.
    
 
 0.849
A0A060W2G2
Uncharacterized protein.
   
 
 0.847
A0A060YDD9
Uncharacterized protein.
   
 
 0.847
A0A060X8N3
Uncharacterized protein.
   
  
 0.842
A0A060XV23
Uncharacterized protein.
   
 
 0.841
A0A060Y295
Uncharacterized protein.
   
 
 0.841
A0A060YBQ5
Uncharacterized protein.
   
  
 0.833
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.