STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XEK1IF rod domain-containing protein; Belongs to the intermediate filament family. (603 aa)    
Predicted Functional Partners:
A0A060WXK3
Uncharacterized protein; Belongs to the actin family.
    
 0.931
A0A060WME5
FHA domain-containing protein.
    
 0.892
A0A060YT39
MCRS_N domain-containing protein.
    
 0.892
A0A060Z596
Helicase C-terminal domain-containing protein.
    
 0.889
A0A061A8X2
Uncharacterized protein.
    
 0.889
A0A060WDJ1
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.888
A0A060YM41
AAA domain-containing protein.
    
  0.876
A0A060Z8B0
Uncharacterized protein.
    
  0.876
A0A060Y6T3
Uncharacterized protein.
   
 0.870
A0A060Z070
Uncharacterized protein.
   
 0.870
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.