STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XHT1Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
A0A060VPP8
Uncharacterized protein.
   
 
 0.880
A0A060WWL1
Uncharacterized protein.
   
 
 0.880
A0A060XTG6
Uncharacterized protein.
   
 
 0.880
A0A060XUJ1
Uncharacterized protein.
   
 
 0.880
A0A060XX73
Uncharacterized protein.
   
 
 0.880
A0A060VYD9
Uncharacterized protein.
   
 
 0.876
A0A060X915
Uncharacterized protein.
   
 
 0.876
A0A060XA68
Uncharacterized protein.
   
 
 0.876
A0A060XUQ3
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.846
A0A060XWQ6
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.846
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.