STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XHU0Uncharacterized protein. (270 aa)    
Predicted Functional Partners:
A0A060XVD9
Uncharacterized protein.
    
 0.882
A0A060VWX4
UEV domain-containing protein.
   
 0.862
A0A060W411
Uncharacterized protein; Belongs to the LDH/MDH superfamily.
   
 0.862
A0A060VVU2
Uncharacterized protein.
  
 0.809
A0A060XCD2
Uncharacterized protein.
  
 0.809
A0A060X767
Uncharacterized protein.
   
 0.808
A0A060XY43
Uncharacterized protein.
   
 0.808
A0A060W5B2
RING-type domain-containing protein.
  
 0.778
A0A060YT34
RING-type domain-containing protein.
  
 0.778
A0A060WT94
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
  0.754
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.