STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XIS2DPH-type MB domain-containing protein. (85 aa)    
Predicted Functional Partners:
A0A060VWJ0
2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2.
   
 0.992
A0A060YW20
Uncharacterized protein.
    
 
 0.972
A0A060Z5R7
Uncharacterized protein.
    
 
 0.972
A0A060YEE3
Uncharacterized protein.
   
 0.969
A0A060YVQ6
Uncharacterized protein.
   
 0.969
A0A060YVY9
Uncharacterized protein.
   
 0.969
A0A060YP32
Uncharacterized protein.
   
 
 0.882
A0A060YRV9
Uncharacterized protein.
   
 
 0.882
A0A060Z1G6
N-acetyltransferase domain-containing protein.
   
 
 0.882
A0A060VWY9
Tr-type G domain-containing protein.
    
 0.872
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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