STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XIU6Uncharacterized protein. (475 aa)    
Predicted Functional Partners:
A0A060WBM1
VPS9 domain-containing protein.
    
 0.997
A0A060XBA3
Uncharacterized protein.
    
 0.997
A0A060XHK0
Uncharacterized protein.
    
 0.997
A0A060YYY9
Uncharacterized protein.
    
 0.997
A0A060VTQ1
Uncharacterized protein.
    
 0.911
A0A060VWR0
Uncharacterized protein.
    
 0.911
A0A060W7X2
Uncharacterized protein.
    
 0.911
A0A060WDW7
Uncharacterized protein.
    
 0.911
A0A060WEB7
ANK_REP_REGION domain-containing protein.
    
 0.911
A0A060WHG0
Ubiquitin-like domain-containing protein.
    
 0.886
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.