STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XJC0Uncharacterized protein. (378 aa)    
Predicted Functional Partners:
A0A060WAI5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.805
A0A060XDM2
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.805
A0A060WGR4
Uncharacterized protein.
   
 0.718
A0A060X8N4
Uncharacterized protein.
   
 0.718
A0A060XFA2
Uncharacterized protein.
   
 0.718
A0A060XSJ1
Uncharacterized protein.
   
 0.718
A0A060YD20
Uncharacterized protein.
  
0.668
ROA0
Heterogeneous nuclear ribonucleoprotein A0.
  
0.668
A0A060XBK6
Uncharacterized protein.
  
0.667
A0A060XI29
RRM domain-containing protein.
  
  0.665
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.