STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XJD1Uncharacterized protein. (407 aa)    
Predicted Functional Partners:
A0A060WFJ8
Uncharacterized protein.
    
 0.961
A0A060YI31
Uncharacterized protein.
     
 0.931
A0A060VMB9
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
     
 0.887
A0A060VYM6
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
     
 0.887
A0A060Y4D3
Uncharacterized protein.
  
  
 
0.865
A0A060XGD0
Uncharacterized protein.
  
  
 
0.863
A0A060XHF9
Uncharacterized protein.
  
  
 
0.863
A0A060XZ39
Uncharacterized protein.
     
 0.842
A0A060Y2I5
Uncharacterized protein.
     
 0.842
A0A060XR84
Uncharacterized protein.
    
 
 0.562
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.