A0A060XJW3 protein (Oncorhynchus mykiss) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A060XJW3

Uncharacterized protein. (465 aa)

Predicted Functional Partners:

A0A060Y1P8

0.970

A0A060YDZ1

0.966

A0A060X4W9

0.960

A0A060XIH1

0.960

A0A060W6Q3

0.958

A0A060WG73

0.958

A0A060W8R2

0.954

A0A061A7G3

0.909

A0A060VXP4

0.901

A0A060VY51

0.901

Your Current Organism:

Oncorhynchus mykiss

NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A060VXP4	A0A060W6Q3	Protein kinase domain-containing protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VXP4	A0A060W8R2	Protein kinase domain-containing protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VXP4	A0A060WG73	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VXP4	A0A060X4W9	Protein kinase domain-containing protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VXP4	A0A060XIH1	Protein kinase domain-containing protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VXP4	A0A060XJW3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.901
A0A060VXP4	A0A060Y1P8	Protein kinase domain-containing protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.471
A0A060VXP4	A0A060YDZ1	Protein kinase domain-containing protein.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VY51	A0A060W6Q3	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VY51	A0A060W8R2	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VY51	A0A060WG73	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Uncharacterized protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VY51	A0A060X4W9	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VY51	A0A060XIH1	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060VY51	A0A060XJW3	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	Uncharacterized protein.	0.901
A0A060VY51	A0A060Y1P8	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.471
A0A060VY51	A0A060YDZ1	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.449
A0A060W6Q3	A0A060VXP4	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	Protein kinase domain-containing protein.	0.449
A0A060W6Q3	A0A060VY51	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	Uncharacterized protein; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.	0.449
A0A060W6Q3	A0A060W8R2	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.828
A0A060W6Q3	A0A060X4W9	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family.	0.829