STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XKX6Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (132 aa)    
Predicted Functional Partners:
A0A060YN16
Uncharacterized protein.
  
 
  0.697
A0A060YRC9
Uncharacterized protein.
  
 
  0.689
A0A060WGR7
Uncharacterized protein.
  
 
  0.679
A0A060WLU2
Uncharacterized protein.
  
 
  0.677
A0A060WP36
Uncharacterized protein.
  
 
  0.603
A0A060XTJ1
Uncharacterized protein.
  
 
  0.587
A0A060XKD4
Uncharacterized protein.
  
 
  0.561
A0A060VZQ8
Uncharacterized protein.
  
    0.535
A0A060WLQ6
Uncharacterized protein.
  
     0.529
A0A060W832
Uncharacterized protein.
  
     0.518
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.