STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XLB9G_PROTEIN_RECEP_F3_4 domain-containing protein. (81 aa)    
Predicted Functional Partners:
A0A060XVD9
Uncharacterized protein.
    
  0.874
A0A060YFQ6
G_PROTEIN_RECEP_F3_4 domain-containing protein.
  
 
 0.793
A0A060VVB2
WD_REPEATS_REGION domain-containing protein.
    
   0.762
A0A060W2G3
Uncharacterized protein.
    
   0.762
A0A060YTK1
G_PROTEIN_RECEP_F3_4 domain-containing protein.
    
0.724
A0A060Z8U4
ANF_receptor domain-containing protein.
    
 0.724
A0A060ZIW5
G_PROTEIN_RECEP_F3_4 domain-containing protein.
    
 0.724
A0A060YVN4
WH1 domain-containing protein.
    
  0.686
A0A060VM28
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
  0.681
A0A060VXZ0
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
  0.681
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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