STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XLN1Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
A0A060VX61
Uncharacterized protein.
   
    0.539
A0A060XLG8
Uncharacterized protein.
   
    0.539
A0A060YFY4
Methyltransf_11 domain-containing protein.
   
  
 0.470
A0A060YFP3
Uncharacterized protein.
   
  
 0.457
A0A060XCF9
Uncharacterized protein.
   
  
 0.451
A0A060WK46
Uncharacterized protein.
      
 0.450
A0A060XE91
Uncharacterized protein.
      
 0.450
A0A060XSC0
Uncharacterized protein.
      
 0.450
A0A060Y7V4
Uncharacterized protein.
      
 0.410
A0A060X9S8
Uncharacterized protein.
   
    0.400
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.