STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XNV6RPA_C domain-containing protein. (253 aa)    
Predicted Functional Partners:
A0A060Y461
Uncharacterized protein.
   
 0.996
RFA3
Replication protein A 14 kDa subunit.
   
 0.996
Onmy-UAA
Non-classical MHC class I antigen; Belongs to the MHC class I family.
    
 0.995
A0A060WEB4
Helicase ATP-binding domain-containing protein.
   
 0.993
A0A060WLM0
Helicase C-terminal domain-containing protein.
   
 0.993
A0A060WH56
DUF1767 domain-containing protein.
    
 0.988
A0A060WW34
Rep_fac-A_C domain-containing protein.
   
 0.987
A0A060XPN1
Rep_fac-A_C domain-containing protein.
   
 0.987
A0A060XPT1
Rep-A_N domain-containing protein.
   
 0.987
A0A060XWW5
Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.
   
 0.987
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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