STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XPP0Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family. (438 aa)    
Predicted Functional Partners:
A0A060VTS9
Uncharacterized protein.
   
 0.814
A0A060W792
Uncharacterized protein.
   
 0.814
A0A060WGP7
Uncharacterized protein.
   
 0.814
A0A060WNL8
Uncharacterized protein.
   
 0.814
A0A060X9G7
Uncharacterized protein.
   
 0.814
A0A060W4K3
Uncharacterized protein.
    
 0.811
A0A060WVB5
Uncharacterized protein.
    
 0.811
A0A060X2M3
Uncharacterized protein.
    
 0.811
A0A060YRH1
Guanylate kinase-like domain-containing protein.
   
 
 0.676
A0A060YSE6
Uncharacterized protein.
   
 
 0.676
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.