STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XQS2ELYS domain-containing protein. (1960 aa)    
Predicted Functional Partners:
A0A060Z5V5
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.987
A0A060YJN5
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.986
A0A060WDC0
WD_REPEATS_REGION domain-containing protein.
    
 0.985
A0A060W3G5
Uncharacterized protein.
   
 0.978
A0A060WHJ9
Uncharacterized protein.
   
 0.970
A0A060X0R2
Uncharacterized protein.
   
 0.970
A0A060VYU5
WD_REPEATS_REGION domain-containing protein.
    
 0.952
A0A060WB48
WD_REPEATS_REGION domain-containing protein.
    
 0.952
A0A060XYU7
Uncharacterized protein.
    
 0.951
A0A060YBP6
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.950
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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