STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XQX6Uncharacterized protein. (3049 aa)    
Predicted Functional Partners:
A0A060WND2
Asp-B-Hydro_N domain-containing protein.
   
 
 0.837
A0A060VW65
Uncharacterized protein.
     
 0.832
A0A060WZU7
Peptidylprolyl isomerase.
    
 0.782
A0A060X010
Peptidylprolyl isomerase.
    
 0.782
A0A060Y6N6
Peptidylprolyl isomerase.
    
 0.782
FKB1A
Peptidylprolyl isomerase.
    
 0.782
A0A060YC57
Uncharacterized protein.
    
 0.772
A0A060X1N4
Uncharacterized protein.
    
 0.771
A0A060X0K0
Peptidylprolyl isomerase.
    
 0.745
FKBP3
Peptidylprolyl isomerase.
    
 0.745
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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