STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XRH8Fork-head domain-containing protein. (300 aa)    
Predicted Functional Partners:
A0A060VUH5
Cytochrome b5 heme-binding domain-containing protein.
     
 0.834
A0A060XJ41
Uncharacterized protein.
    
 0.727
A0A060XK59
Non-specific serine/threonine protein kinase.
    
 0.727
A0A060XQE1
Non-specific serine/threonine protein kinase.
    
 0.727
A0A060YZB0
Protein kinase domain-containing protein.
    
 0.727
A0A060ZHR6
Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.690
A0A060XHU0
Uncharacterized protein.
    
 0.670
A0A060YUS2
Uncharacterized protein.
    
 0.670
A0A060YFM4
Uncharacterized protein.
    
 0.655
A0A060YLP9
Uncharacterized protein.
    
 0.655
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.