STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XSX0Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (266 aa)    
Predicted Functional Partners:
A0A060WLQ6
Uncharacterized protein.
  
  
  0.712
A0A060WTL9
Amino acid transporter.
    
 0.708
A0A060WTZ1
Amino acid transporter.
    
 0.708
A0A060VZQ8
Uncharacterized protein.
  
 
  0.697
A0A060Z3T0
Uncharacterized protein.
  
  
  0.696
A0A060XSK0
Uncharacterized protein.
  
 
  0.656
A0A060VTN8
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.645
A0A060X1I2
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.645
A0A060VVS1
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.612
A0A060W5Q8
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.612
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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