STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XTL6BRCT domain-containing protein. (146 aa)    
Predicted Functional Partners:
A0A060YLC4
Helicase ATP-binding domain-containing protein.
  
 0.999
A0A060YNG8
HRDC domain-containing protein.
  
 0.999
A0A060VZQ0
ANK_REP_REGION domain-containing protein.
   
 0.992
A0A060VZY3
Uncharacterized protein.
   
 0.992
RTEL1
Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...]
  
 0.990
A0A060WVQ2
Uncharacterized protein.
    
 0.990
A0A060XN85
HELICc2 domain-containing protein.
  
 0.990
A0A060XQV6
Helicase ATP-binding domain-containing protein.
  
 0.990
A0A060YAY8
Cell cycle checkpoint control protein; Belongs to the rad9 family.
    
 0.990
A0A060WLW5
RING-type domain-containing protein.
   
 0.989
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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