STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XUP9Uncharacterized protein. (403 aa)    
Predicted Functional Partners:
A0A060WJ79
Uncharacterized protein.
    
 0.966
A0A060W7K0
Uncharacterized protein.
    
 0.965
A0A060W2H6
Serine/threonine-protein phosphatase.
    
 0.922
A0A060W5P9
Serine/threonine-protein phosphatase.
    
 0.922
A0A060W5V6
Uncharacterized protein.
    
 0.922
A0A060WDC2
Serine/threonine-protein phosphatase.
    
 0.922
A0A060WHP4
Mitogen-activated protein kinase.
    
 0.922
A0A060WH36
Mitogen-activated protein kinase.
    
 0.920
A0A060XCU8
Uncharacterized protein.
    
 0.920
A0A060XE22
Mitogen-activated protein kinase.
    
 0.920
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.