STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XYJ2Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1114 aa)    
Predicted Functional Partners:
A0A060XAI2
Integrin beta; Belongs to the integrin beta chain family.
   
 0.945
A0A060WWD9
Integrin beta; Belongs to the integrin beta chain family.
   
 0.939
A0A060X309
Integrin beta; Belongs to the integrin beta chain family.
   
 0.939
A0A060X9W5
Uncharacterized protein.
   
 0.939
A0A060XDK5
Fibronectin type-III domain-containing protein.
   
 0.936
A0A060YQP7
Integrin beta.
   
 0.936
A0A060ZDF4
Integrin beta.
   
 0.936
A0A060YR87
Integrin beta.
    
 0.931
A0A060Z6A4
Uncharacterized protein.
   
 0.913
A0A060Z7T9
Integrin beta.
   
 0.913
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.