STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060XZU9Uncharacterized protein. (153 aa)    
Predicted Functional Partners:
A0A060X3Y1
Carrier domain-containing protein.
  
 0.909
A0A060YQZ9
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 0.892
A0A060X1E6
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 0.885
A0A060XEM5
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 0.885
A0A060WWI8
Uncharacterized protein.
   
 0.866
A0A060XME4
Uncharacterized protein.
   
 0.866
A0A060YUZ6
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 0.866
A0A060WR13
Choline dehydrogenase.
    
 0.863
A0A060WQI9
Uncharacterized protein.
    
 0.862
A0A060Z8E9
Uncharacterized protein.
   
 0.860
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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