STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060Y202PDZ domain-containing protein. (234 aa)    
Predicted Functional Partners:
A0A060W281
Dystrobrevin.
    
 
 0.699
A0A060W2X1
ZZ-type domain-containing protein.
    
 
 0.699
A0A060W4V0
Uncharacterized protein.
    
 
 0.699
A0A060W831
ZZ-type domain-containing protein.
    
 
 0.699
A0A060WDZ9
Uncharacterized protein.
    
 
 0.699
A0A060XWT7
Uncharacterized protein.
    
 
 0.699
A0A060Z812
EF-hand_2 domain-containing protein.
    
 
 0.699
A0A060X1K0
Uncharacterized protein.
    
 
0.612
A0A060XL01
Uncharacterized protein.
    
 
 0.612
A0A060XV60
Nitric oxide synthase; Produces nitric oxide (NO).
    
 
 0.612
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.